fig6

Use of “default” parameter settings when analyzing single cell RNA sequencing data using Seurat: a biologist's perspective

Figure 6. Results of using different methods of determining variable genes. Venn diagram illustrating overlap of variable genes detected by three different methods (A) (vst, mean.var.plot, and dispersion). Bar graphs showing differences in: cluster number (B); percent of cells called concordantly (C); and the ARI measurement (D). Mean.var and dispersion methods are compared to the baseline method, vst in (C, D). ARI: adjusted rand index

Journal of Translational Genetics and Genomics
ISSN 2578-5281 (Online)
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